2.5 Availability of Data and Materials

The BigWig file for the H3K27Me3 primary T CD8+ memory cells from peripheral blood ChIP-seq data from the Human Roadmap Epigenomics project
was downloaded from the AnnotationHub package (2.13.1) under accession AH33458 (Morgan 2017; Roadmap Epigenomics Consortium et al. 2015). The BAM file corresponding to the H1 cell line ChIP-seq data is available at NCBI GEO under accession GSM433167 (Barrett et al. 2013; Roadmap Epigenomics Consortium et al. 2015). The SNP array data for the H1 cell line data is available at NCBI GEO under accession GPL18952 (Roadmap Epigenomics Consortium et al. 2015).

The plyranges package is open source under an Artistic 2.0 license (Lee, Lawrence, and Cook 2018). The software can be obtained via the Bioconductor project website https://bioconductor.org or accessed via Github https://github.com/sa-lee/plyranges.