Linear Embedding Drivers

pca_exact(deferred = FALSE, fold = Inf)

pca_irlba(deferred = FALSE, fold = Inf, extra.work = 7, ...)

pca_random(deferred = FALSE, fold = Inf, ...)

Arguments

deferred	Logical scalar indicating whether centering/scaling should be deferred, see `?"BiocSingular-options"`.
fold	Numeric scalar specifying the minimum fold-difference for cross-product calculation, see `?"BiocSingular-options"`.
extra.work	Integer scalar, additional dimensionality of the workspace in `runIrlbaSVD`.
...	Additional arguments to pass to `runIrlbaSVD` or `runRandomSVD`. This should not include any named arguments in those functions.

A BiocSingular::BiocSingularParam() object.

Different engines for computing linear embeddings (mostly PCA at this stage). Usually you won't need to interact with these functions directly.