Download, retrieve and cache macrophage ATAC seq results

Download, retrieve and cache macrophage ATAC seq results

cache_atac_se(verbose = FALSE)

Source

https://zenodo.org/record/1188300/files/

Arguments

verbose

Provide progress bar for downloading and updating the cache? (Default is FALSE)

Value

the path to the .rds file containing the SummarizedExperiment

Details

This code generates the SummarizedExperiment object used for ATAC seq peaks data analysis as discussed in the vignette.

Examples

if (interactive()) {
 path_to_se <- cache_atac_se()
 atac <- readRDS(path_to_se)
}